Package: enviPathR
Title: Client for the 'enviPath' 'RESTful' API
Version: 1.0.1
Authors@R: 
    c(person(given = "Giulio", family = "Benedetti",
          role = c("aut", "cre", "cph"),
          email = "giulio.benedetti@utu.fi",
          comment = c(ORCID = "0000-0002-8732-7692")))
Description: The environmental pathway database ('enviPath') is a key
        resource for the functional annotation and pathway prediction
        of microbial communities, providing knowledge on
        biotransformation pathways along with the chemical reactions
        and produced compounds. This package enables the programmatic
        access to 'enviPath' by porting the database 'RESTful' API from
        R. This includes methods to both retrieve entries and predict
        pathways for custom compounds.
biocViews: Software, DataImport, Cheminformatics, Annotation, Pathways,
        FunctionalPrediction
Depends: R (>= 4.1.0)
Imports: BiocParallel, httr2, stats, stringr, tools
Suggests: BiocStyle, ggraph, httptest2, igraph, knitr, rmarkdown,
        testthat (>= 3.0.0)
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 8.0.0
URL: https://envipath.github.io/enviPathR/
BugReports: https://github.com/enviPath/enviPathR/issues
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/pak/sysreqs: libicu-dev libssl-dev
Repository: https://envipath.r-universe.dev
Date/Publication: 2026-10-16 04:03:35 UTC
RemoteUrl: https://github.com/envipath/envipathr
RemoteRef: HEAD
RemoteSha: ad264a9aee39536fbf07ed66873eb857ba29e538
NeedsCompilation: no
Packaged: 2026-10-16 07:31:56 UTC; root
Author: Giulio Benedetti [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-8732-7692>)
Maintainer: Giulio Benedetti <giulio.benedetti@utu.fi>